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BACTERIAL · YEAST

Microbial and precision fermentation

Connect strain, substrate and inoculum history with fermentation measurements and product outcomes. Compare growth, feed, oxygen demand and metabolic behavior to investigate the constraints shaping productivity.

Bacterial · YeastMicrobial and precision fermentation
SCIENTIFIC CONTEXTILLUSTRATIVE / NOT TO SCALE05 / 08
OUTCOMES TRACKEDBiomasstiterproductivity

MODALITY-SPECIFIC PROCESS INTELLIGENCE

Link microbial kinetics to feed, oxygen and scale.

01Strain & seed
02Fermentation
03Recovery
04Product analysis
FOCUS AREA · Strain & seed

Strain and process context

Carry strain identity, inoculum history, material lots and operating conditions into run comparisons.

01
Scientific workflow01 / 04

EVIDENCE · MODELS · DECISIONS

Keep every conclusion connected.

Evidence in Bio Hub

  • Strain, substrate and inoculum history
  • Feed, oxygen, off-gas and temperature
  • Biomass, metabolites and product measurements

Models in Bio Twin

  • Growth and substrate-consumption kinetics
  • Oxygen-demand and transport assessment
  • Feed and productivity scenarios

Scientific decisions

  • Compare feeding strategies
  • Identify oxygen or substrate constraints
  • Assess robustness across scale

Process outcomes to evaluate: Biomass · titer · productivity

SOFT SENSORS

Estimate what you cannot continuously measure.

Explore process-specific estimates of biomass, metabolites, product titer and purification performance using scientific models and available process measurements.

Explore BioMedAna Soft Sensors ↗

EXAMPLE INVESTIGATION

Is a productivity change driven by feeding, biology or an oxygen constraint?

01/ 04

Connect evidence

Align strain, seed, feed, oxygen and off-gas measurements with fermentation phases.

01HUB
Example investigation01 / 04
02/ 04

Compare context

Compare growth, substrate and product trajectories across representative runs.

02
Example investigation02 / 04
03/ 04

Evaluate explanations

Assess potential oxygen-transfer and metabolic limitations with the relevant process model.

03
Example investigation03 / 04
04/ 04

Review next steps

Recommend the measurements or experiments needed to distinguish the competing explanations.

04HUMAN APPROVAL
Example investigation04 / 04

Bio Agents can coordinate the scientific work across evidence and models, while Bio OS preserves governance and human review. The configured workflow determines which tasks and models are available.

Bring us this process challenge ↗

EVALUATION & SCOPE

Make the demonstration specific.

Specify the organism, substrate, product and operating range. Transport constraints, overflow metabolism and model parameters must be evaluated for the process and scale under consideration.

What evidence should we bring?

Strain, substrate and inoculum history. Feed, oxygen, off-gas and temperature. Biomass, metabolites and product measurements. Include the process question, relevant run context and the analytical methods used to assess the outcome.

How do models support the workflow?

Growth and substrate-consumption kinetics. Oxygen-demand and transport assessment. Feed and productivity scenarios. Scope and evaluation criteria are defined for your process, data and intended decision.

What should we validate before using the results?

Specify the organism, substrate, product and operating range. Transport constraints, overflow metabolism and model parameters must be evaluated for the process and scale under consideration.

EXPLORE OTHER MODALITIES

ENTERPRISE USE CASE

Separating fermentation productivity loss from recovery loss

An enterprise investigation reconciling assay basis, production-phase accounting and recovery performance across a fermentation network.

Explore the complete use case ↗